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tlp [2019-07-02 10:33:05]
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tlp [2019-07-02 10:33:05]

thioredoxin-like protein
locus
BSU18030
pI
4.44
mw
9.58 kDa
protein length
83 aa Sequence Blast
gene length
252 bp Sequence Blast
function
unknown
product
thioredoxin-like protein
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.3|Electron transport/ other]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    1,930,447 → 1,930,698

    The protein

    Protein family

  • tlp family (according to Swiss-Prot)

    • [SW|Localization]

  • spore core (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|5D79D9D38B588FE0EC688D54FE68E6F49238DA46|sspN]-[gene|DE52E15D900F9665E35D2C8138DA3ABFC2B7B723|tlp]
    description
    [Pubmed|10333516]

    sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|15699190,10333516], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]
  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190,10333516], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed during sporulation in the forespore ([protein|search|SigF], [protein|search|SigG]) [Pubmed|15699190,10333516]
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    additional information

  • the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]

    • Biological materials

    Mutant

  • BKE18030 (Δ[gene|DE52E15D900F9665E35D2C8138DA3ABFC2B7B723|tlp]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCGGATGTACCTCCTAG, downstream forward: _UP4_TAAAAAACCAGGGAAACCTG
  • BKK18030 (Δ[gene|DE52E15D900F9665E35D2C8138DA3ABFC2B7B723|tlp]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCGGATGTACCTCCTAG, downstream forward: _UP4_TAAAAAACCAGGGAAACCTG

    • References

  • 16497325,15699190,10333516,30782632